2I7K Transcription date Aug 31, 2006
title Solution Structure Of The Bromodomain Of Human Brd7 Protein
authors H.Sun, J.Liu, J.Zhang, H.Huang, J.Wu, Y.Shi
compound source
Molecule: Bromodomain-Containing Protein 7
Chain: A
Fragment: Bromodomain
Synonym: 75 Kda Bromodomain Protein, Protein Celtix-1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Strain: Brain
Gene: Brd7
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21 (De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet22b
methodSolution NMR
Primary referenceSolution structure of BRD7 bromodomain and its interaction with acetylated peptides from histone H3 and H4., Sun H, Liu J, Zhang J, Shen W, Huang H, Xu C, Dai H, Wu J, Shi Y, Biochem Biophys Res Commun. 2007 Jun 29;358(2):435-41. Epub 2007 May 2. PMID:17498659
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (652 Kb) [Save to disk]
  • Biological Unit Coordinates (2i7k.pdb1.gz) 32 Kb
  • CSU: Contacts of Structural Units for 2I7K
  • Original NMR restraints for 2I7K from PDB
  • Retrieve 2I7K in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2I7K from S2C, [Save to disk]
  • View 2I7K in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2I7K
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2I7K, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2i7k] [2i7k_A]
  • SWISS-PROT database: [Q9NPI1]
  • Domain organization of [BRD7_HUMAN] by SWISSPFAM
  • Domain found in 2I7K: [BROMO ] by SMART
  • Other resources with information on 2I7K
  • Community annotation for 2I7K at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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