2I8N Replication, Transcription Regulator date Sep 02, 2006
title Solution Structure Of The Second Bromodomain Of Brd4
authors Y.Liu, J.H.Wu, Y.Y.Shi
compound source
Molecule: Bromodomain-Containing Protein 4
Chain: A
Fragment: C-Terminal Bromodomain
Synonym: Hunk1 Protein
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Brd4
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(Gold)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet22b(+)
methodSolution NMR
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (591 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 2I8N
  • Original NMR restraints for 2I8N from PDB
  • Retrieve 2I8N in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2I8N from S2C, [Save to disk]
  • View 2I8N in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2I8N
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2I8N, from MSDmotif at EBI
  • Fold representative 2i8n from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2i8n] [2i8n_A]
  • SWISS-PROT database: [O60885]
  • Domain organization of [BRD4_HUMAN] by SWISSPFAM
  • Domain found in 2I8N: [BROMO ] by SMART
  • Other resources with information on 2I8N
  • Community annotation for 2I8N at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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