2I9H Oxidoreductase date Sep 05, 2006
title Nmr Solution Structure Of The Reduced Form Of Thioredoxin 1 (Trx1)
authors A.S.Pinheiro, G.C.Amorim, F.C.L.Almeida, A.P.Valente
compound source
Molecule: Thioredoxin I
Chain: A
Synonym: Thioredoxin Isoform 1, Tr-I, Thioredoxin 2,
Engineered: Yes
 Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932
Gene: Trx1, Trx2, Ylr043c
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet17b
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceNMR solution structure of the reduced form of thioredoxin 1 from Sacharomyces cerevisiae., Pinheiro AS, Amorim GC, Netto LE, Almeida FC, Valente AP, Proteins. 2008 Feb 1;70(2):584-7. PMID:17932921
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (509 Kb) [Save to disk]
  • Biological Unit Coordinates (2i9h.pdb1.gz) 26 Kb
  • CSU: Contacts of Structural Units for 2I9H
  • Original NMR restraints for 2I9H from PDB
  • Retrieve 2I9H in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2I9H from S2C, [Save to disk]
    • View 2I9H in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2I9H
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2I9H, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2i9h_A] [2i9h]
  • SWISS-PROT database: [P22217]
  • Domain organization of [TRX1_YEAST] by SWISSPFAM
    • Other resources with information on 2I9H
  • Community annotation for 2I9H at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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