2IS6 Hydrolase Dna date Oct 16, 2006
title Crystal Structure Of Uvrd-Dna-Adpmgf3 Ternary Complex
authors W.Yang, J.Y.Lee
compound source
Molecule: 5'-D(Cpgpapgpcpapcptpgpcpapgptpgpc Tptpgptptpapt)-3';
Chain: C, D
Engineered: Yes
Synthetic: Yes

Molecule: Dna Helicase II
Chain: A, B
Ec: 3.6.1.-
Engineered: Yes
Mutation: Yes

Organism_scientific: Escherichia Coli
Organism_taxid: 562
Gene: Uvrd
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.210 R_Free 0.240
crystal
cell
length a length b length c angle alpha angle beta angle gamma
102.336 96.609 110.930 90.00 94.05 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand ADP, GOL, MG, MGF enzyme Hydrolase E.C.3.6.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceUvrD helicase unwinds DNA one base pair at a time by a two-part power stroke., Lee JY, Yang W, Cell. 2006 Dec 29;127(7):1349-60. PMID:17190599
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (240 Kb) [Save to disk]
  • Biological Unit Coordinates (2is6.pdb1.gz) 234 Kb
  • LPC: Ligand-Protein Contacts for 2IS6
  • CSU: Contacts of Structural Units for 2IS6
  • Likely Quarternary Molecular Structure file(s) for 2IS6
  • Structure Factors (792 Kb)
  • Retrieve 2IS6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2IS6 from S2C, [Save to disk]
  • Re-refined 2is6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2IS6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2IS6
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2IS6, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2is6_D] [2is6_C] [2is6] [2is6_A] [2is6_B]
  • SWISS-PROT database: [P03018]
  • Domain organization of [UVRD_ECOLI] by SWISSPFAM
  • Other resources with information on 2IS6
  • Community annotation for 2IS6 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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