2IWR Hydrolase date Jul 03, 2006
title Gtpase Like Domain Of Centaurin Gamma 1 (Human)
authors J.M.Elkins, M.Soundararajan, X.Yang, E.Papagrigoriou, M.Sundstro A.Edwards, C.Arrowsmith, J.Weigelt, D.A.Doyle, Structural Genom Consortium (Sgc)
compound source
Molecule: Centaurin Gamma 1
Chain: A
Fragment: Gtpase Like Domain, Residues 402-577
Synonym: Arf-Gap With Gtp-Binding Protein-Like, Ankyrin Rep Pleckstrin Homology Domains 2, Agap-2, Phosphatidylinositol Enhancer, Pike, Gtp-Binding And Gtpase Activating Protein 2
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_plasmid: Plic-Sgc
Other_details: Image Consortium Clone Id 5218187
symmetry Space Group: P 21 21 21
R_factor 0.150 R_Free 0.214
crystal
cell
length a length b length c angle alpha angle beta angle gamma
36.256 62.146 67.498 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.50 Å
ligand CAF enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe centaurin gamma-1 GTPase-like domain functions as an NTPase., Soundararajan M, Yang X, Elkins JM, Sobott F, Doyle DA, Biochem J. 2007 Feb 1;401(3):679-88. PMID:17037982
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (68 Kb) [Save to disk]
  • Biological Unit Coordinates (2iwr.pdb1.gz) 62 Kb
  • LPC: Ligand-Protein Contacts for 2IWR
  • CSU: Contacts of Structural Units for 2IWR
  • Likely Quarternary Molecular Structure file(s) for 2IWR
  • Structure Factors (334 Kb)
  • Retrieve 2IWR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2IWR from S2C, [Save to disk]
  • Re-refined 2iwr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2IWR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2IWR
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2IWR, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2iwr_A] [2iwr]
  • SWISS-PROT database: [Q99490]
  • Domain organization of [AGAP2_HUMAN] by SWISSPFAM
  • Domain found in 2IWR: [small_GTPase ] by SMART
  • Other resources with information on 2IWR
  • Community annotation for 2IWR at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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