2IY4 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand FE enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, G, U, D, B, I, X, Q, F, T, E, C, J, N, O, S, R, V, L, P, Y, M, H, K


Primary referenceThe mutations Lys 114 --> Gln and Asp 126 --> Asn disrupt an intersubunit salt bridge and convert Listeria innocua Dps into its natural mutant Listeria monocytogenes Dps. Effects on protein stability at Low pH., Bellapadrona G, Chiaraluce R, Consalvi V, Ilari A, Stefanini S, Chiancone E, Proteins. 2007 Mar 1;66(4):975-83. PMID:17186524
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (614 Kb) [Save to disk]
  • Biological Unit Coordinates (2iy4.pdb1.gz) 304 Kb
  • Biological Unit Coordinates (2iy4.pdb2.gz) 308 Kb
  • LPC: Ligand-Protein Contacts for 2IY4
  • CSU: Contacts of Structural Units for 2IY4
  • Likely Quarternary Molecular Structure file(s) for 2IY4
  • Structure Factors (1378 Kb)
  • Retrieve 2IY4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2IY4 from S2C, [Save to disk]
  • Re-refined 2iy4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2IY4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2iy4_N] [2iy4_O] [2iy4_P] [2iy4_Q] [2iy4_R] [2iy4_S] [2iy4_T] [2iy4_U] [2iy4_V] [2iy4_X] [2iy4_Y] [2iy4] [2iy4_A] [2iy4_B] [2iy4_C] [2iy4_D] [2iy4_E] [2iy4_F] [2iy4_G] [2iy4_H] [2iy4_I] [2iy4_J] [2iy4_K] [2iy4_L] [2iy4_M]
  • SWISS-PROT database: [Q8Y8G1]

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science