2J0G	Lectin	date	Aug 03, 2006
title	L-Ficolin Complexed To N-Acetyl-Mannosamine
authors	V.Garlatti, C.Gaboriaud
compound		source
Molecule: Ficolin-2 Chain: A, B, C, D, E, F Fragment: Binding Domain, Residues 97-313 Synonym: Collagenfibrinogen Domain-Containing Protein 2, L Ficolin-B, Serum Lectin P35, Ebp-37, Hucolin; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Tissue: Plasma Expression_system: Trichoplusia Ni Expression_system_taxid: 7111 Expression_system_cell_line: High Five Expression_system_vector_type: Baculovirus
symmetry	Space Group: P 32	R_factor 0.193 R_Free 0.248
crystal cell	length a length b length c angle alpha angle beta angle gamma 96.940 96.940 139.470 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.85 Å
ligand	BM3, CA, FUC, MAN, NAG	enzyme
Primary reference	Structural insights into the innate immune recognition specificities of L- and H-ficolins., Garlatti V, Belloy N, Martin L, Lacroix M, Matsushita M, Endo Y, Fujita T, Fontecilla-Camps JC, Arlaud GJ, Thielens NM, Gaboriaud C, EMBO J. 2007 Jan 24;26(2):623-33. Epub 2007 Jan 11. PMID:17215869

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (213 Kb) [Save to disk] Biological Unit Coordinates (2j0g.pdb1.gz) 104 Kb Biological Unit Coordinates (2j0g.pdb2.gz) 103 Kb LPC: Ligand-Protein Contacts for 2J0G CSU: Contacts of Structural Units for 2J0G Likely Quarternary Molecular Structure file(s) for 2J0G Structure Factors (265 Kb) Retrieve 2J0G in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2J0G from S2C, [Save to disk] Re-refined 2j0g structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2J0G in 3D

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Visual 3D analysis of 2J0G

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2J0G, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2j0g_F] [2j0g_B] [2j0g_C] [2j0g_A] [2j0g] [2j0g_E] [2j0g_D] SWISS-PROT database: [Q15485] Domain organization of [FCN2_HUMAN] by SWISSPFAM Domain found in 2J0G: [FBG ] by SMART

Other resources with information on 2J0G

Community annotation for 2J0G at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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