2J0I Transferase date Aug 03, 2006
title Crystal Structure Of The Human P21-Activated Kinase 4
authors J.E.Debreczeni, J.Eswaran, E.Ugochukwu, E.Papagrigoriou, A.Turnb Delft, C.Arrowsmith, J.Weigelt, A.Edwards, M.Sundstrom, S.Knapp
compound source
Molecule: Serinethreonine-Protein Kinase Pak 4
Chain: A
Fragment: Kinase Domain, Residues 291-591
Synonym: Human P21-Activated Kinase 4, Pak-4, P21-Activated
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_vector: Pgex-6p-2nde-Xho
symmetry Space Group: P 41 21 2
R_factor 0.172 R_Free 0.215
length a length b length c angle alpha angle beta angle gamma
63.514 63.514 178.478 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.60 Å
ligand EDO, SEP enzyme Transferase E.C. BRENDA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (107 Kb) [Save to disk]
  • Biological Unit Coordinates (2j0i.pdb1.gz) 103 Kb
  • LPC: Ligand-Protein Contacts for 2J0I
  • CSU: Contacts of Structural Units for 2J0I
  • Likely Quarternary Molecular Structure file(s) for 2J0I
  • Structure Factors (635 Kb)
  • Retrieve 2J0I in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2J0I from S2C, [Save to disk]
  • Re-refined 2j0i structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2J0I in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2J0I
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2J0I, from MSDmotif at EBI
  • Fold representative 2j0i from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2j0i] [2j0i_A]
  • SWISS-PROT database: [O96013]
  • Domain organization of [PAK4_HUMAN] by SWISSPFAM
  • Domain found in 2J0I: [S_TKc ] by SMART
  • Other resources with information on 2J0I
  • Community annotation for 2J0I at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science