2J3S Structural Protein date Aug 23, 2006
title Crystal Structure Of The Human Filamin A Ig Domains 19 To 21
authors T.R.Kiema, J.Ylanne
compound source
Molecule: Filamin-A
Chain: A, B
Fragment: Immunoglobulin-Like Domains 19 To 21, Residues 20
Synonym: Alpha-Filamin, Filamin-1, Endothelial Actin-Bindin Protein, Actin-Binding Protein 280, Abp-280, Nonmuscle Fil
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_vector: Pet24d
symmetry Space Group: C 2 2 21
R_factor 0.252 R_Free 0.297
crystal
cell
length a length b length c angle alpha angle beta angle gamma
72.280 78.390 229.040 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.5 Å
ligand BR, DIO, GOL enzyme
Primary referenceStructure of three tandem filamin domains reveals auto-inhibition of ligand binding., Lad Y, Kiema T, Jiang P, Pentikainen OT, Coles CH, Campbell ID, Calderwood DA, Ylanne J, EMBO J. 2007 Sep 5;26(17):3993-4004. Epub 2007 Aug 9. PMID:17690686
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (84 Kb) [Save to disk]
  • Biological Unit Coordinates (2j3s.pdb1.gz) 42 Kb
  • Biological Unit Coordinates (2j3s.pdb2.gz) 36 Kb
  • LPC: Ligand-Protein Contacts for 2J3S
  • CSU: Contacts of Structural Units for 2J3S
  • Likely Quarternary Molecular Structure file(s) for 2J3S
  • Structure Factors (168 Kb)
  • Retrieve 2J3S in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2J3S from S2C, [Save to disk]
  • Re-refined 2j3s structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2J3S in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2J3S
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2J3S, from MSDmotif at EBI
  • Fold representative 2j3s from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2j3s_B] [2j3s_A] [2j3s]
  • SWISS-PROT database: [P21333]
  • Belongs to the dystrophin (dystrophin) family according to TCDB.
  • Domain organization of [FLNA_HUMAN] by SWISSPFAM
  • Domain found in 2J3S: [IG_FLMN ] by SMART
  • Other resources with information on 2J3S
  • Community annotation for 2J3S at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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