2J4I	Hydrolase	date	Aug 31, 2006
title	Crystal Structure Of A Human Factor Xa Inhibitor Complex
authors	R.J.Young, M.Campbell, A.D.Borthwick, D.Brown, C.Chan, M.A.Conver M.C.Crowe, S.Dayal, H.Diallo, H.A.Kelly, N.Paul King, S.Kleantho C.L.Kurtis, A.M.Mason, J.E.Mordaunt, C.Patel, A.J.Pateman, S.Sen G.P.Shah, P.W.Smith, N.S.Watson, H.E.Weston, P.Zhou
compound		source
Molecule: Coagulation Factor X Chain: A Fragment: Activated Desgla, Residues 235-488 Synonym: Stuart Factor, Stuart-Prower Factor, Activated Fac Heavy Chain; Ec: 3.4.21.6 Other_details: Disulphide Linked To Other Chain		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Other_details: Purchased From Enzyme Research Labs. Isolate Human Blood;
Molecule: Coagulation Factor X Chain: B Fragment: Activated Desgla, Residues 46-179 Synonym: Stuart Factor, Stuart-Prower Factor, Factor X Ligh Ec: 3.4.21.6 Other_details: Disulphide Linked To Other Chain		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Other_details: Purchased From Enzyme Research Labs. Isolate Human Blood
symmetry	Space Group: P 21 21 21	R_factor 0.189 R_Free 0.234
crystal cell	length a length b length c angle alpha angle beta angle gamma 56.862 72.862 78.142 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.80 Å
ligand	CA, GSJ BindingDB	enzyme	Hydrolase E.C.3.4.21.6 BRENDA
Gene Ontology	Chain Function Process Component A B
Primary reference	Structure- and property-based design of factor Xa inhibitors: pyrrolidin-2-ones with acyclic alanyl amides as P4 motifs., Young RJ, Campbell M, Borthwick AD, Brown D, Burns-Kurtis CL, Chan C, Convery MA, Crowe MC, Dayal S, Diallo H, Kelly HA, King NP, Kleanthous S, Mason AM, Mordaunt JE, Patel C, Pateman AJ, Senger S, Shah GP, Smith PW, Watson NS, Weston HE, Zhou P, Bioorg Med Chem Lett. 2006 Dec 1;16(23):5953-7. Epub 2006 Sep 18. PMID:16982190

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk] Biological Unit Coordinates (2j4i.pdb1.gz) 50 Kb LPC: Ligand-Protein Contacts for 2J4I CSU: Contacts of Structural Units for 2J4I Likely Quarternary Molecular Structure file(s) for 2J4I Structure Factors (219 Kb) Retrieve 2J4I in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2J4I from S2C, [Save to disk] Re-refined 2j4i structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Visual 3D analysis of 2J4I

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2J4I, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2j4i] [2j4i_B] [2j4i_A] SWISS-PROT database: [P00742] Domain organization of [FA10_HUMAN] by SWISSPFAM Domains found in 2J4I: [EGF_CA] [EGF_like] [GLA] [Tryp_SPc ] by SMART

Other resources with information on 2J4I

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