2J4O Protein Binding date Sep 01, 2006
title Structure Of Tab1
authors D.Van Aalten
compound source
Molecule: Mitogen-Activated Protein Kinase Kinase Kinase 7- Interacting Protein 1;
Chain: A
Fragment: N-Terminal Pp2c-Like Domain, Residues 1-401
Synonym: Tgf-Beta-Activated Kinase 1-Binding Protein 1, Tak Protein 1, Tab1;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 3 2 1
R_factor 0.228 R_Free 0.236
crystal
cell
length a length b length c angle alpha angle beta angle gamma
141.961 141.961 65.905 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.25 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceTAK1-binding protein 1 is a pseudophosphatase., Conner SH, Kular G, Peggie M, Shepherd S, Schuttelkopf AW, Cohen P, Van Aalten DM, Biochem J. 2006 Nov 1;399(3):427-34. PMID:16879102
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (62 Kb) [Save to disk]
  • Biological Unit Coordinates (2j4o.pdb1.gz) 58 Kb
  • CSU: Contacts of Structural Units for 2J4O
  • Likely Quarternary Molecular Structure file(s) for 2J4O
  • Structure Factors (252 Kb)
  • Retrieve 2J4O in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2J4O from S2C, [Save to disk]
  • Re-refined 2j4o structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2J4O in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2J4O
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2J4O, from MSDmotif at EBI
  • Fold representative 2j4o from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2j4o] [2j4o_A]
  • SWISS-PROT database: [Q15750]
  • Domain organization of [TAB1_HUMAN] by SWISSPFAM
  • Domain found in 2J4O: [PP2Cc ] by SMART
  • Other resources with information on 2J4O
  • Community annotation for 2J4O at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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