2J7T Transferase date Oct 17, 2006
title Crystal Structure Of Human Serine Threonine Kinase-10 Bound
authors A.C.W.Pike, P.Rellos, O.Fedorov, S.Das, J.Debreczeni, F.Sobott, S. P.Savitsky, J.Eswaran, A.P.Turnbull, E.Papagrigoriou, E.Ugochuk F.Gorrec, C.C.Umeano, F.Von Delft, C.H.Arrowsmith, A.Edwards, J. M.Sundstrom, S.Knapp
compound source
Molecule: Serinethreonine-Protein Kinase 10
Chain: A
Fragment: Kinase Domain, Residues 18-317
Synonym: Lymphocyte-Oriented Kinase, Serine-Threonine Prote 10;
Ec: 2.7.11.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_plasmid: Pnic28-Bsa4
symmetry Space Group: I 2 2 2
R_factor 0.204 R_Free 0.235
crystal
cell
length a length b length c angle alpha angle beta angle gamma
49.192 112.960 133.817 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand 274, ACT, CA enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceActivation segment dimerization: a mechanism for kinase autophosphorylation of non-consensus sites., Pike AC, Rellos P, Niesen FH, Turnbull A, Oliver AW, Parker SA, Turk BE, Pearl LH, Knapp S, EMBO J. 2008 Feb 20;27(4):704-14. Epub 2008 Jan 31. PMID:18239682
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (55 Kb) [Save to disk]
  • Biological Unit Coordinates (2j7t.pdb1.gz) 94 Kb
  • LPC: Ligand-Protein Contacts for 2J7T
  • CSU: Contacts of Structural Units for 2J7T
  • Likely Quarternary Molecular Structure file(s) for 2J7T
  • Structure Factors (204 Kb)
  • Retrieve 2J7T in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2J7T from S2C, [Save to disk]
  • Re-refined 2j7t structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2J7T in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2J7T
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2J7T, from MSDmotif at EBI
  • Fold representative 2j7t from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2j7t_A] [2j7t]
  • SWISS-PROT database: [O94804]
  • Domain organization of [STK10_HUMAN] by SWISSPFAM
  • Domain found in 2J7T: [S_TKc ] by SMART
  • Other resources with information on 2J7T
  • Community annotation for 2J7T at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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