2J8O Structural Protein date Oct 26, 2006
title Structure Of The Immunoglobulin Tandem Repeat Of Titin A168-
authors S.Mueller, S.Lange, I.Kursula, M.Gautel, M.Wilmanns
compound source
Molecule: Titin
Chain: A, B
Fragment: Ig Like Domain, Residues 24430-24623
Synonym: Connectin
Ec: 2.7.11.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Organ: Heart
Tissue: Muscle
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Petm11
symmetry Space Group: C 2 2 2
R_factor 0.249 R_Free 0.300
crystal
cell
length a length b length c angle alpha angle beta angle gamma
95.560 122.487 98.699 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.49 Å
ligand GOL enzyme Transferase E.C.2.7.11.1 BRENDA
Primary referenceRigid Conformation of an Immunoglobulin Domain Tandem Repeat in the A-band of the Elastic Muscle Protein Titin., Muller S, Lange S, Gautel M, Wilmanns M, J Mol Biol. 2007 Aug 10;371(2):469-80. Epub 2007 May 25. PMID:17574571
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (68 Kb) [Save to disk]
  • Biological Unit Coordinates (2j8o.pdb1.gz) 32 Kb
  • Biological Unit Coordinates (2j8o.pdb2.gz) 32 Kb
  • LPC: Ligand-Protein Contacts for 2J8O
  • CSU: Contacts of Structural Units for 2J8O
  • Likely Quarternary Molecular Structure file(s) for 2J8O
  • Structure Factors (289 Kb)
  • Retrieve 2J8O in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2J8O from S2C, [Save to disk]
  • Re-refined 2j8o structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2J8O in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2J8O
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2J8O, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2j8o] [2j8o_A] [2j8o_B]
  • SWISS-PROT database: [Q8WZ42]
  • Domain organization of [TITIN_HUMAN] by SWISSPFAM
  • Domain found in 2J8O: [IG ] by SMART
  • Other resources with information on 2J8O
  • Community annotation for 2J8O at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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