2J9N	Hydrolase	date	Nov 14, 2006
title	Robotically Harvested Trypsin Complexed With Benzamidine Con Polypeptide Mediated Crystal Contacts
authors	R.Viola, P.Carman, J.Walsh, E.Miller, M.Benning, D.Frankel, A.Mcph R.Cudney, B.Rupp
compound		source
Molecule: Cationic Trypsin Chain: A Fragment: Residues 21-243 Ec: 3.4.21.4		Organism_scientific: Bos Taurus Organism_common: Bovine Organism_taxid: 9913 Organ: Pancreas Tissue: Smooth Other_details: Sigma
Molecule: Unknown Peptide Chain: B Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630
Molecule: Unknown Peptide Chain: C Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630
symmetry	Space Group: P 21 21 21	R_factor 0.154 R_Free 0.176
crystal cell	length a length b length c angle alpha angle beta angle gamma 53.924 56.695 66.054 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.50 Å
ligand	BEN, CA, IPH, NA BindingDB	enzyme	Hydrolase E.C.3.4.21.4 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Operator-assisted harvesting of protein crystals using a universal micromanipulation robot., Viola R, Carman P, Walsh J, Miller E, Benning M, Frankel D, McPherson A, Cudney B, Rupp B, J Appl Crystallogr. 2007 Jun 1;40(Pt 3):539-545. Epub 2007 May 15. PMID:19461845

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (50 Kb) [Save to disk] Biological Unit Coordinates (2j9n.pdb1.gz) 40 Kb LPC: Ligand-Protein Contacts for 2J9N CSU: Contacts of Structural Units for 2J9N Likely Quarternary Molecular Structure file(s) for 2J9N Structure Factors (242 Kb) Retrieve 2J9N in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2J9N from S2C, [Save to disk] Re-refined 2j9n structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2J9N in 3D

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Visual 3D analysis of 2J9N

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2J9N, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2j9n] [2j9n_B] [2j9n_C] [2j9n_A] SWISS-PROT database: [P00760] Domain organization of [TRY1_BOVIN] by SWISSPFAM Domain found in 2J9N: [Tryp_SPc ] by SMART

Other resources with information on 2J9N

Community annotation for 2J9N at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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