2JC2 Metal Binding Protein date Dec 19, 2006
title The Crystal Structure Of The Natural F112l Human Sorcin Mutant
authors S.Franceschini, A.Ilari, G.Colotti, E.Chiancone
compound source
Molecule: Sorcin
Chain: A, B, C, D
Synonym: 22 Kda Protein, Cp-22, V19, F112l Human Sorcin Mutant;
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Organ: Heart, Muscle, Brain And Adrenal Medulla
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_plasmid: Pet22b
symmetry Space Group: P 65
R_factor 0.252 R_Free 0.289
crystal
cell
length a length b length c angle alpha angle beta angle gamma
64.385 64.385 314.837 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.5 Å
ligand SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceMolecular basis for the impaired function of the natural F112L sorcin mutant: X-ray crystal structure, calcium affinity, and interaction with annexin VII and the ryanodine receptor., Franceschini S, Ilari A, Verzili D, Zamparelli C, Antaramian A, Rueda A, Valdivia HH, Chiancone E, Colotti G, FASEB J. 2007 Aug 15;. PMID:17699613
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (113 Kb) [Save to disk]
  • Biological Unit Coordinates (2jc2.pdb1.gz) 55 Kb
  • Biological Unit Coordinates (2jc2.pdb2.gz) 55 Kb
  • LPC: Ligand-Protein Contacts for 2JC2
  • CSU: Contacts of Structural Units for 2JC2
  • Likely Quarternary Molecular Structure file(s) for 2JC2
  • Structure Factors (195 Kb)
  • Retrieve 2JC2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JC2 from S2C, [Save to disk]
  • Re-refined 2jc2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2JC2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2JC2
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2JC2, from MSDmotif at EBI
  • Fold representative 2jc2 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2jc2_A] [2jc2_C] [2jc2_D] [2jc2_B] [2jc2]
  • SWISS-PROT database: [P30626]
  • Domain organization of [SORCN_HUMAN] by SWISSPFAM
  • Domain found in 2JC2: [EFh ] by SMART
  • Other resources with information on 2JC2
  • Community annotation for 2JC2 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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