2JFK Transferase date Feb 02, 2007
title Structure Of The Mat Domain Of Human Fas With Malonyl-Coa
authors G.Bunkoczi, K.Kavanagh, V.Hozjan, A.Rojkova, S.Watt, X.Wu, C.H.Arr A.Edwards, M.Sundstrom, J.Weigelt, S.Smith, U.Oppermann
compound source
Molecule: Fatty Acid Synthase
Chain: A, B, C, D
Fragment: Mat Domain, Residues 422-831
Ec: 2.3.1.85
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_variant: R3
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pnic28-Bsa4
symmetry Space Group: P 21 21 21
R_factor 0.222 R_Free 0.271
crystal
cell
length a length b length c angle alpha angle beta angle gamma
82.917 91.410 261.609 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand COA, MCS enzyme Transferase E.C.2.3.1.85 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (250 Kb) [Save to disk]
  • Biological Unit Coordinates (2jfk.pdb1.gz) 62 Kb
  • Biological Unit Coordinates (2jfk.pdb2.gz) 62 Kb
  • Biological Unit Coordinates (2jfk.pdb3.gz) 63 Kb
  • Biological Unit Coordinates (2jfk.pdb4.gz) 63 Kb
  • LPC: Ligand-Protein Contacts for 2JFK
  • CSU: Contacts of Structural Units for 2JFK
  • Likely Quarternary Molecular Structure file(s) for 2JFK
  • Structure Factors (1046 Kb)
  • Retrieve 2JFK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JFK from S2C, [Save to disk]
  • Re-refined 2jfk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2JFK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2JFK
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2JFK, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2jfk_B] [2jfk_C] [2jfk] [2jfk_A] [2jfk_D]
  • SWISS-PROT database: [P49327]
  • Domain organization of [FAS_HUMAN] by SWISSPFAM
  • Other resources with information on 2JFK
  • Community annotation for 2JFK at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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