2JJK Hydrolase date Apr 09, 2008
title Fructose-1,6-Bisphosphatase(D-Fructose-1,6-Bisphosphate -1-Phosphohydrolase) (E.C.3.1.3.11) Complexed With A Dual Binding Amp Site Inhibitor
authors A.Ruf, C.Joseph, J.Benz, B.Fol, T.Tetaz, P.Hebeisen
compound source
Molecule: Fructose-1,6-Bisphosphatase 1
Chain: A, B, C, D
Synonym: D-Fructose-1,6- Bisphosphate 1-Phosphohydrolase 1, Fbpase 1;
Ec: 3.1.3.11
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Tissue: Liver
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_plasmid: Pet
symmetry Space Group: P 21 21 21
R_factor 0.213 R_Free 0.266
crystal
cell
length a length b length c angle alpha angle beta angle gamma
67.176 83.012 277.234 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand R15 BindingDB enzyme Hydrolase E.C.3.1.3.11 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceAllosteric FBPase inhibitors gain 10(5) times in potency when simultaneously binding two neighboring AMP sites., Hebeisen P, Kuhn B, Kohler P, Gubler M, Huber W, Kitas E, Schott B, Benz J, Joseph C, Ruf A, Bioorg Med Chem Lett. 2008 Jul 5. PMID:18650089
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (224 Kb) [Save to disk]
  • Biological Unit Coordinates (2jjk.pdb1.gz) 217 Kb
  • LPC: Ligand-Protein Contacts for 2JJK
  • CSU: Contacts of Structural Units for 2JJK
  • Likely Quarternary Molecular Structure file(s) for 2JJK
  • Structure Factors (1306 Kb)
  • Retrieve 2JJK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JJK from S2C, [Save to disk]
  • Re-refined 2jjk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2JJK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2JJK
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2JJK, from MSDmotif at EBI
  • Fold representative 2jjk from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2jjk_B] [2jjk_A] [2jjk_D] [2jjk] [2jjk_C]
  • SWISS-PROT database: [P09467]
  • Domain organization of [F16P1_HUMAN] by SWISSPFAM
  • Other resources with information on 2JJK
  • Community annotation for 2JJK at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science