2JMU Hydrolase date Dec 05, 2006
title Nmr Structure Of The Mouse Thiamine Triphosphatase
authors J.Song, J.L.Markley, Center For Eukaryotic Structural Genomics
compound source
Molecule: Thiamine-Triphosphatase
Chain: A
Synonym: Thtpase
Ec: 3.6.1.28
Engineered: Yes
 Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Gene: Thtpa
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Rossetta(De3) Plyss
Expression_system_vector_type: Vector
Expression_system_vector: Pvp13
methodSolution NMR
ligand
enzyme Hydrolase E.C.3.6.1.28 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis for the catalytic mechanism of mammalian 25-kDa thiamine triphosphatase., Song J, Bettendorff L, Tonelli M, Markley JL, J Biol Chem. 2008 Apr 18;283(16):10939-48. Epub 2008 Feb 14. PMID:18276586
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1224 Kb) [Save to disk]
  • Biological Unit Coordinates (2jmu.pdb1.gz) 62 Kb
  • CSU: Contacts of Structural Units for 2JMU
  • Original NMR restraints for 2JMU from PDB
  • Retrieve 2JMU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JMU from S2C, [Save to disk]
    • View 2JMU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2JMU
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2JMU, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2jmu] [2jmu_A]
  • SWISS-PROT database: [Q8JZL3]
  • Domain organization of [THTPA_MOUSE] by SWISSPFAM
  • Domain found in 2JMU: [CYTH ] by SMART
    • Other resources with information on 2JMU
  • Community annotation for 2JMU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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