2JNB Rna Binding Protein date Jan 04, 2007
title Solution Structure Of Rna-Binding Protein 15.5k
authors S.E.Soss, P.F.Flynn
compound source
Molecule: Nhp2-Like Protein 1
Chain: A
Synonym: High Mobility Group-Like Nuclear Protein 2 Homolog U4u6.U5 Tri-Snrnp 15.5 Kda Protein, Otk27, Hsnu13;
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Nhp2l1
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21 De3
Expression_system_vector_type: Vector
Expression_system_vector: Pet 11a
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceFunctional Implications for a Prototypical K-Turn Binding Protein from Structural and Dynamical Studies of 15.5K(,)., Soss SE, Flynn PF, Biochemistry. 2007 Dec 25;46(51):14979-86. Epub 2007 Nov 29. PMID:18044964
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (771 Kb) [Save to disk]
  • Biological Unit Coordinates (2jnb.pdb1.gz) 40 Kb
  • CSU: Contacts of Structural Units for 2JNB
  • Original NMR restraints for 2JNB from PDB
  • Retrieve 2JNB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JNB from S2C, [Save to disk]
    • View 2JNB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2JNB
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2JNB, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2jnb_A] [2jnb]
  • SWISS-PROT database: [P55769]
  • Domain organization of [NH2L1_HUMAN] by SWISSPFAM
    • Other resources with information on 2JNB
  • Community annotation for 2JNB at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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