2JOH Unknown Function date Mar 13, 2007
title Nmr Structure Of Rabbit Prion Protein Mutation S173n
authors J.Li, D.Lin
compound source
Molecule: Major Prion Protein
Chain: A
Fragment: Residues 91-228
Synonym: Prp, Prp27-30, Prp33-35c, Cd230 Antigen
Engineered: Yes
Mutation: Yes
 Organism_scientific: Oryctolagus Cuniculus
Organism_common: Rabbit
Organism_taxid: 9986
Gene: Prnp, Prp
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Vector
Expression_system_vector: Pet-30a(+)
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceUnique structural characteristics of the rabbit prion protein., Wen Y, Li J, Yao W, Xiong M, Hong J, Peng Y, Xiao G, Lin D, J Biol Chem. 2010 Jul 16. PMID:20639199
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (477 Kb) [Save to disk]
  • Biological Unit Coordinates (2joh.pdb1.gz) 31 Kb
  • CSU: Contacts of Structural Units for 2JOH
  • Original NMR restraints for 2JOH from PDB
  • Retrieve 2JOH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JOH from S2C, [Save to disk]
    • View 2JOH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2JOH
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2JOH, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2joh] [2joh_A]
  • SWISS-PROT database: [Q95211]
  • Domain organization of [PRIO_RABIT] by SWISSPFAM
  • Domain found in 2JOH: [PRP ] by SMART
    • Other resources with information on 2JOH
  • Community annotation for 2JOH at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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