OCA Atlas for 2JOR

2JOR

NMR Solution Structure, Stability, and Interaction of the Recombinant Bovine Fibrinogen alphaC-Domain Fragment

date

authors

Burton, R.A., Tsurupa, G., Roy, H., Nico, T., Leonid, M.

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction, 20 Models

resolution

Gene
Ontology

Chain	Function	Process	Component
A

Primary reference

NMR Solution Structure, Stability, and Interaction of the Recombinant Bovine Fibrinogen alphaC-Domain Fragment., Burton RA, Tsurupa G, Hantgan RR, Tjandra N, Medved L, Biochemistry. 2007 Jul 24;46(29):8550-8560. Epub 2007 Jun 23. PMID:17590019

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (402 Kb) [Save to disk]

Biological Unit Coordinates (2jor.pdb1.gz) 20 Kb

CSU: Contacts of Structural Units for 2JOR

Original NMR restraints for 2JOR from PDB

Retrieve 2JOR in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 2JOR from S2C, [Save to disk]

View 2JOR in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2JOR

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

3D motif for 2JOR, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2jor] [2jor_A]

SWISS-PROT database: [P02672]

Domain organization of [FIBA_BOVIN] by SWISSPFAM

Other resources with information on 2JOR

Community annotation for 2JOR at PDBWiki (http://pdbwiki.org)

MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

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