2JPS Protein Binding date May 23, 2007
title Nab2 N-Terminal Domain
authors R.Grant, N.J.Marshall, J.Yang, M.Fasken, S.Kelly, M.T.Harreman, D.Neuhaus, A.H.Corbett, M.Stewart
compound source
Molecule: Nuclear Polyadenylated Rna-Binding Protein Nab2
Chain: A
Fragment: Residues 1-120
Engineered: Yes
Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932
Gene: Nab2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Vector
Expression_system_vector: Pet30a
methodSolution NMR
Primary referenceStructure of the N-Terminal Mlp1-Binding Domain of the Saccharomyces cerevisiae mRNA-Binding Protein, Nab2., Grant RP, Marshall NJ, Yang JC, Fasken MB, Kelly SM, Harreman MT, Neuhaus D, Corbett AH, Stewart M, J Mol Biol. 2007 Dec 4;. PMID:18190927
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1207 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 2JPS
  • Original NMR restraints for 2JPS from PDB
  • Retrieve 2JPS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JPS from S2C, [Save to disk]
  • View 2JPS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2JPS
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2JPS, from MSDmotif at EBI
  • Fold representative 2jps from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2jps] [2jps_A]
  • SWISS-PROT database: [P32505]
  • Domain organization of [NAB2_YEAST] by SWISSPFAM
  • Other resources with information on 2JPS
  • Community annotation for 2JPS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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