2JQ6 Metal Binding Protein date May 29, 2007
title Structure Of Eh-Domain Of Ehd1
authors F.P.Kieken, M.Jovic, S.Caplan, P.L.Sorgen
compound source
Molecule: Eh Domain-Containing Protein 1
Chain: A
Fragment: Eh Domain, Sequence Database Residues 401-534
Synonym: Testilin, Hpast1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ehd1, Past, Past1
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Vector
Expression_system_vector: Pgex 6p-2
methodSolution NMR
ligand CA enzyme
Primary referenceEH domain of EHD1., Kieken F, Jovic M, Naslavsky N, Caplan S, Sorgen PL, J Biomol NMR. 2007 Dec;39(4):323-9. Epub 2007 Sep 26. PMID:17899392
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (401 Kb) [Save to disk]
  • Biological Unit Coordinates (2jq6.pdb1.gz) 40 Kb
  • LPC: Ligand-Protein Contacts for 2JQ6
  • CSU: Contacts of Structural Units for 2JQ6
  • Original NMR restraints for 2JQ6 from PDB
  • Retrieve 2JQ6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JQ6 from S2C, [Save to disk]
  • View 2JQ6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2JQ6
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2JQ6, from MSDmotif at EBI
  • Fold representative 2jq6 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2jq6_A] [2jq6]
  • SWISS-PROT database: [Q9H4M9]
  • Domain organization of [EHD1_HUMAN] by SWISSPFAM
  • Domain found in 2JQ6: [EH ] by SMART
  • Other resources with information on 2JQ6
  • Community annotation for 2JQ6 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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