2JQZ Ligase date Jun 15, 2007
title Solution Structure Of The C2 Domain Of Human Smurf2
authors S.Wiesner, A.A.Ogunjimi, H.Wang, D.Rotin, F.Sicheri, J.L.Wrana, J. Kay
compound source
Molecule: E3 Ubiquitin-Protein Ligase Smurf2
Chain: A
Synonym: Smad Ubiquitination Regulatory Factor 2, Smad-Spec Ubiquitin Ligase 2, Hsmurf2;
Ec: 6.3.2.-
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Smurf2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_variant: Codonplus
Expression_system_vector_type: Vector
Expression_system_vector: Modified Pet24d
methodSolution NMR
ligand
enzyme Ligase E.C.6.3.2 BRENDA
Primary referenceAutoinhibition of the HECT-Type Ubiquitin Ligase Smurf2 through Its C2 Domain., Wiesner S, Ogunjimi AA, Wang HR, Rotin D, Sicheri F, Wrana JL, Forman-Kay JD, Cell. 2007 Aug 24;130(4):651-62. PMID:17719543
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (776 Kb) [Save to disk]
  • Biological Unit Coordinates (2jqz.pdb1.gz) 40 Kb
  • CSU: Contacts of Structural Units for 2JQZ
  • Retrieve 2JQZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JQZ from S2C, [Save to disk]
  • View 2JQZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2JQZ
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2JQZ, from MSDmotif at EBI
  • Fold representative 2jqz from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2jqz] [2jqz_A]
  • SWISS-PROT database: [Q9HAU4]
  • Domain organization of [SMUF2_HUMAN] by SWISSPFAM
  • Domain found in 2JQZ: [C2 ] by SMART
  • Other resources with information on 2JQZ
  • Community annotation for 2JQZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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