2JR7 Metal Binding Protein date Jun 21, 2007
title Solution Structure Of Human Desr1
authors F.Wu, J.Wu, Y.Shi
compound source
Molecule: Dph3 Homolog
Chain: A
Synonym: Csl-Type Zinc Finger-Containing Protein 2, Delgef- Interacting Protein 1, Delgip1;
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Dph3, Desr1, Zcsl2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)Gold
Expression_system_vector_type: Vector
Expression_system_vector: Pet22b (+)
methodSolution NMR
ligand ZN enzyme
note 2JR7 is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSolution structure of human DESR1, a CSL zinc-binding protein., Wu F, Zhang J, Sun J, Huang H, Ji P, Chu W, Yu M, Yang F, Wu Z, Wu J, Shi Y, Proteins. 2008 Apr;71(1):514-8. PMID:18214955
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (430 Kb) [Save to disk]
  • Biological Unit Coordinates (2jr7.pdb1.gz) 22 Kb
  • LPC: Ligand-Protein Contacts for 2JR7
  • CSU: Contacts of Structural Units for 2JR7
  • Original NMR restraints for 2JR7 from PDB
  • Retrieve 2JR7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JR7 from S2C, [Save to disk]
  • View 2JR7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2JR7
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2JR7, from MSDmotif at EBI
  • Fold representative 2jr7 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2jr7_A] [2jr7]
  • SWISS-PROT database: [Q96FX2]
  • Domain organization of [DPH3_HUMAN] by SWISSPFAM
  • Other resources with information on 2JR7
  • Community annotation for 2JR7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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