2JRC Hydrolase date Jun 22, 2007
title Solution Structure Of Peptidyl-Trna Hydrolase From Mycobacterium Tuberculosis H37rv.
authors S.V.S.R.K.Pulavarti, A.Jain, P.P.Pathak, A.Arora
compound source
Molecule: Peptidyl-Trna Hydrolase
Chain: A
Synonym: Pth
Ec: 3.1.1.29
Engineered: Yes
Organism_scientific: Mycobacterium Tuberculosis
Strain: H37rv
Gene: Pth
Expression_system: Escherichia Coli
Expression_system_strain: Bl21de3
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28b
methodSolution NMR
ligand
enzyme Hydrolase E.C.3.1.1.29 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSolution structure and dynamics of peptidyl-tRNA hydrolase from Mycobacterium tuberculosis H37Rv., Pulavarti SV, Jain A, Pathak PP, Mahmood A, Arora A, J Mol Biol. 2008 Apr 18;378(1):165-77. Epub 2008 Feb 21. PMID:18342886
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1809 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 2JRC
  • Retrieve 2JRC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JRC from S2C, [Save to disk]
  • View 2JRC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2JRC
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2JRC, from MSDmotif at EBI
  • Fold representative 2jrc from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2jrc_A] [2jrc]
  • SWISS-PROT database: [P65865]
  • Domain organization of [PTH_MYCTU] by SWISSPFAM
  • Other resources with information on 2JRC
  • Community annotation for 2JRC at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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