2JRJ Ligase date Jun 27, 2007
title Solution Structure Of The Human Pirh2 Ring-H2 Domain. Northe Structural Genomics Consortium Target Ht2b
authors Y.Sheng, A.Lemak, R.C.Laister, B.Wu, C.H.Arrowsmith, Northeast St Genomics Consortium (Nesg)
compound source
Molecule: Ring Finger And Chy Zinc Finger Domain Containing 1;
Chain: A
Fragment: Pirh2 Ring-H2 Domain: Residues 138-189
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Rchy1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex
methodSolution NMR
ligand ZN enzyme
Primary referenceMolecular basis of Pirh2-mediated p53 ubiquitylation., Sheng Y, Laister RC, Lemak A, Wu B, Tai E, Duan S, Lukin J, Sunnerhagen M, Srisailam S, Karra M, Benchimol S, Arrowsmith CH, Nat Struct Mol Biol. 2008 Dec;15(12):1334-42. Epub 2008 Nov 30. PMID:19043414
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (265 Kb) [Save to disk]
  • Biological Unit Coordinates (2jrj.pdb1.gz) 14 Kb
  • LPC: Ligand-Protein Contacts for 2JRJ
  • CSU: Contacts of Structural Units for 2JRJ
  • Original NMR restraints for 2JRJ from PDB
  • Retrieve 2JRJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JRJ from S2C, [Save to disk]
    • View 2JRJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2JRJ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2JRJ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2jrj_A] [2jrj]
  • SWISS-PROT database: [Q96PM5]
  • Domain organization of [ZN363_HUMAN] by SWISSPFAM
  • Domain found in 2JRJ: [RING ] by SMART
    • Other resources with information on 2JRJ
  • Community annotation for 2JRJ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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