2JRL Transcription date Jun 27, 2007
title Solution Structure Of The Beryllofluoride-Activated Ntrc4 Re Domain Dimer
authors C.Lee, E.Hong, M.Doucleff, J.G.Pelton, D.E.Wemmer, Berkeley Struc Genomics Center (Bsgc)
compound source
Molecule: Transcriptional Regulator (Ntrc Family)
Chain: A, B
Fragment: Ntrc4 Receiver Domain: Residues 1-121
Engineered: Yes
Organism_scientific: Aquifex Aeolicus
Strain: Vf5
Gene: Ntrc4, Aq_164
Expression_system: Escherichia Coli
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet21a
methodSolution NMR
Gene AQ
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1406 Kb) [Save to disk]
  • Biological Unit Coordinates (2jrl.pdb1.gz) 71 Kb
  • CSU: Contacts of Structural Units for 2JRL
  • Original NMR restraints for 2JRL from PDB
  • Retrieve 2JRL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JRL from S2C, [Save to disk]
  • View 2JRL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2JRL
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2JRL, from MSDmotif at EBI
  • Fold representative 2jrl from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2jrl_B] [2jrl] [2jrl_A]
  • SWISS-PROT database: [O66551]
  • Domain organization of [O66551_AQUAE] by SWISSPFAM
  • Domain found in 2JRL: [REC ] by SMART
  • Other resources with information on 2JRL
  • Community annotation for 2JRL at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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