2JRZ	Oxidoreductase	date	Jun 29, 2007
title	Solution Structure Of The Brightarid Domain From The Human Protein.
authors	C.Koehler, S.Bishop, E.F.Dowler, A.Diehl, P.Schmieder, M.Leidert, M.Sundstrom, C.H.Arrowsmith, J.Wiegelt, A.Edwards, H.Oschkinat, Structural Genomics Consortium (Sgc)
compound		source
Molecule: Histone Demethylase Jarid1c Chain: A Fragment: Bright, Arid Domain Synonym: Jumonjiarid Domain-Containing Protein 1c, Protein Protein Xe169; Ec: 1.14.11.- Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Jarid1c, Dxs1272e, Smcx, Xe169 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3) Expression_system_variant: Rosetta De3 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pnic28-Bsa4
method	Solution NMR
ligand		enzyme	Oxidoreductase E.C.1.14.11 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Backbone and sidechain 1H, 13C and 15N resonance assignments of the Bright/ARID domain from the human JARID1C (SMCX) protein., Koehler C, Bishop S, Dowler EF, Schmieder P, Diehl A, Oschkinat H, Ball LJ, Biomol NMR Assign. 2008 Jun;2(1):9-11. Epub 2007 Dec 8. PMID:19636912

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (627 Kb) [Save to disk] Biological Unit Coordinates (2jrz.pdb1.gz) 32 Kb CSU: Contacts of Structural Units for 2JRZ Original NMR restraints for 2JRZ from PDB Retrieve 2JRZ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2JRZ from S2C, [Save to disk]

View 2JRZ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2JRZ

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2JRZ, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2jrz] [2jrz_A] SWISS-PROT database: [P41229] Domain organization of [KDM5C_HUMAN] by SWISSPFAM Domains found in 2JRZ: [ARID] [BRIGHT ] by SMART

Other resources with information on 2JRZ

Community annotation for 2JRZ at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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