2JS7 Signaling Protein date Jun 29, 2007
title Solution Nmr Structure Of Human Myeloid Differentiation Prim Response (Myd88). Northeast Structural Genomics Target Hr28
authors P.Rossi, T.A.Ramelot, X.Tao, M.Ciano, C.Ho, L.C.Ma, R.Xiao, T.B.Ac M.A.Kennedy, L.Tong, G.T.Montelione, Northeast Structural Geno Consortium (Nesg)
compound source
Molecule: Myeloid Differentiation Primary Response Protein
Chain: A
Fragment: C-Terminal Tir Domain
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Myd88
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)+Magic
Expression_system_vector_type: Plasmid
Expression_system_vector: Hr2869-Nc5j
Expression_system_plasmid: Pet21
methodSolution NMR

Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (882 Kb) [Save to disk]
  • Biological Unit Coordinates (2js7.pdb1.gz) 45 Kb
  • CSU: Contacts of Structural Units for 2JS7
  • Original NMR restraints for 2JS7 from PDB
  • Retrieve 2JS7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JS7 from S2C, [Save to disk]
  • View 2JS7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2JS7
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2JS7, from MSDmotif at EBI
  • Fold representative 2js7 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2js7] [2js7_A]
  • SWISS-PROT database: [Q99836]
  • Domain organization of [MYD88_HUMAN] by SWISSPFAM
  • Domain found in 2JS7: [TIR ] by SMART
  • Other resources with information on 2JS7
  • Community annotation for 2JS7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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