2JTX	Transcription	date	Aug 08, 2007
title	Nmr Structure Of The Tfiie-Alpha Carboxyl Terminus
authors	P.Di Lello, J.G.Omichinski
compound		source
Molecule: Transcription Initiation Factor Iie Subunit Alpha; Chain: A Fragment: Carboxyl Terminus, Residues 336-439 Synonym: Tfiie-Alpha, General Transcription Factor Iie Subunit 1, General Transcription Factor Iie 56 Kda Subunit; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Gtf2e1, Tf2e1 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex-2t
method	Solution NMR
Primary reference	p53 and TFIIEalpha share a common binding site on the Tfb1/p62 subunit of TFIIH., Di Lello P, Miller Jenkins LM, Mas C, Langlois C, Malitskaya E, Fradet-Turcotte A, Archambault J, Legault P, Omichinski JG, Proc Natl Acad Sci U S A. 2008 Jan 8;105(1):106-11. Epub 2007 Dec 26. PMID:18160537

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (311 Kb) [Save to disk] CSU: Contacts of Structural Units for 2JTX Original NMR restraints for 2JTX from PDB Retrieve 2JTX in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2JTX from S2C, [Save to disk]

View 2JTX in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz. On AstexViewer, from MSD-EBI (viewer documentation). On RasMol (Install RasMol freeware) Here's help on how to use RasMol.

Visual 3D analysis of 2JTX

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 2JTX, from MSDmotif at EBI Fold representative 2jtx from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2jtx_A] SWISS-PROT database: [P29083] Domain organization of [T2EA_HUMAN] by SWISSPFAM Alignments of the sequence of 2JTX with the sequences similar proteins can be viewed for 2JTX's classification [T2EA_HUMAN] at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list. A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification [T2EA_HUMAN] at ProtoMap. Click on the Cluster number.

Other resources with information on 2JTX

Community annotation for 2JTX at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

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