2JU2 Transferase date Aug 12, 2007
title Minimized Mean Solution Structure Of The Acyl Carrier Protei From Module 2 Of 6-Deoxyerythronolide B Synthase (Debs)
authors V.Y.Alekseyev, C.W.Liu, J.D.Puglisi, C.Khosla
compound source
Molecule: Erythronolide Synthase
Chain: A
Fragment: Acyl Carrier Protein Domain
Synonym: Orf 1, 6-Deoxyerythronolide B Synthase I, Debs 1
Ec: 2.3.1.94
Engineered: Yes
Organism_scientific: Saccharopolyspora Erythraea
Organism_taxid: 1836
Gene: Erya
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28(A)
Other_details: Stop Codon At The C-Terminus, Before The C-T His-Tag Present In The Expression Vector Plasmid
methodSolution NMR
ligand
enzyme Transferase E.C.2.3.1.94 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSolution structure and proposed domain domain recognition interface of an acyl carrier protein domain from a modular polyketide synthase., Alekseyev VY, Liu CW, Cane DE, Puglisi JD, Khosla C, Protein Sci. 2007 Oct;16(10):2093-107. PMID:17893358
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (27 Kb) [Save to disk]
  • Biological Unit Coordinates (2ju2.pdb1.gz) 24 Kb
  • CSU: Contacts of Structural Units for 2JU2
  • Original NMR restraints for 2JU2 from PDB
  • Retrieve 2JU2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JU2 from S2C, [Save to disk]
  • View 2JU2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2JU2
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2JU2, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ju2] [2ju2_A]
  • SWISS-PROT database: [Q03131]
  • Domain organization of [ERYA1_SACER] by SWISSPFAM
  • Domain found in 2JU2: [PKS_PP ] by SMART
  • Other resources with information on 2JU2
  • Community annotation for 2JU2 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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