2JU4 Hydrolase date Aug 14, 2007
title Nmr Structure Of The Gamma Subunit Of Cgmp Phosphodiesterase
authors J.Song, L.W.Guo, A.E.Ruoho, J.L.Markley, Center For Eukaryotic S Genomics (Cesg)
compound source
Molecule: Retinal Rod Rhodopsin-Sensitive Cgmp 3',5'-Cyclic Phosphodiesterase Subunit Gamma;
Chain: A
Synonym: Gmp-Pde Gamma
Ec: 3.1.4.17
Engineered: Yes
Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Tissue: Retina
Gene: Pde6g, Pdeg
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Ptxbi
methodSolution NMR
ligand RCY enzyme Hydrolase E.C.3.1.4.17 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceIntrinsically disordered gamma-subunit of cGMP phosphodiesterase encodes functionally relevant transient secondary and tertiary structure., Song J, Guo LW, Muradov H, Artemyev NO, Ruoho AE, Markley JL, Proc Natl Acad Sci U S A. 2008 Feb 5;105(5):1505-10. Epub 2008 Jan 29. PMID:18230733
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (2503 Kb) [Save to disk]
  • Biological Unit Coordinates (2ju4.pdb1.gz) 26 Kb
  • LPC: Ligand-Protein Contacts for 2JU4
  • CSU: Contacts of Structural Units for 2JU4
  • Original NMR restraints for 2JU4 from PDB
  • Retrieve 2JU4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JU4 from S2C, [Save to disk]
  • View 2JU4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2JU4
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 2ju4 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ju4_A] [2ju4]
  • SWISS-PROT database: [P04972]
  • Domain organization of [CNRG_BOVIN] by SWISSPFAM
  • Other resources with information on 2JU4
  • Community annotation for 2JU4 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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