2JXC Endocytosis Protein Binding date Nov 12, 2007
title Structure Of The Eps15-Eh2 Stonin2 Complex
authors J.Rumpf, B.Simon, N.Jung, T.Maritzen, V.Haucke, M.Sattler, Y.Groem
compound source
Molecule: Epidermal Growth Factor Receptor Substrate 15
Chain: A
Fragment: Eh 2 Domain
Synonym: Protein Eps15, Af-1p Protein
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Eps15, Af1p
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De 3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex6p1

Molecule: Stonin-2
Chain: B
Synonym: Stoned B
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ston2, Stn2, Stnb
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De 3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex6p1
methodSolution NMR
ligand CA enzyme
note 2JXC is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceStructure of the Eps15-stonin2 complex provides a molecular explanation for EH-domain ligand specificity., Rumpf J, Simon B, Jung N, Maritzen T, Haucke V, Sattler M, Groemping Y, EMBO J. 2008 Feb 6;27(3):558-69. Epub 2008 Jan 17. PMID:18200045
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (399 Kb) [Save to disk]
  • Biological Unit Coordinates (2jxc.pdb1.gz) 40 Kb
  • LPC: Ligand-Protein Contacts for 2JXC
  • CSU: Contacts of Structural Units for 2JXC
  • Original NMR restraints for 2JXC from PDB
  • Retrieve 2JXC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JXC from S2C, [Save to disk]
  • View 2JXC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2JXC
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2JXC, from MSDmotif at EBI
  • Fold representative 2jxc from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2jxc_B] [2jxc] [2jxc_A]
  • SWISS-PROT database: [P42566] [Q8WXE9]
  • Domain organization of [EPS15_HUMAN] [STON2_HUMAN] by SWISSPFAM
  • Domain found in 2JXC: [EH ] by SMART
  • Other resources with information on 2JXC
  • Community annotation for 2JXC at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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