2JYS Hydrolase date Dec 19, 2007
title Solution Structure Of Simian Foamy Virus (Mac) Protease
authors M.J.Hartl, B.M.Woehrl, P.Roesch, K.Schweimer
compound source
Molecule: Proteasereverse Transcriptase
Chain: A
Fragment: Residues 1-101
Ec: 3.4.23.-
Engineered: Yes
 Organism_scientific: Simian Foamy Virus Type 1
Organism_common: Sfvmac
Organism_taxid: 338478
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Vector
Expression_system_vector: Pet28c
methodSolution NMR
ligand
enzyme Hydrolase E.C.3.4.23 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe solution structure of the simian foamy virus protease reveals a monomeric protein., Hartl MJ, Wohrl BM, Rosch P, Schweimer K, J Mol Biol. 2008 Aug 1;381(1):141-9. Epub 2008 Jun 3. PMID:18597783
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (499 Kb) [Save to disk]
  • Biological Unit Coordinates (2jys.pdb1.gz) 25 Kb
  • CSU: Contacts of Structural Units for 2JYS
  • Original NMR restraints for 2JYS from PDB
  • Retrieve 2JYS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JYS from S2C, [Save to disk]
    • View 2JYS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2JYS
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2JYS, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2jys] [2jys_A]
  • SWISS-PROT database: [P23074]
  • Domain organization of [POL_SFV1] by SWISSPFAM
    • Other resources with information on 2JYS
  • Community annotation for 2JYS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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