2JZD NMR structure of the domain 527-651 of the SARS-CoV nonstructural protein nsp3 date
authors Chatterjee, A., Johnson, M.A., Serrano, P., Pedrini, B., Joseph, J., Saikatendu, K., Neuman, B., Stevens, R.C., Wilson, I.A., Buchmeier, M.J., Kuhn, P., Wuthrich, K., JCSG, Joint.Center.for.Structural.Genomics.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffraction, 20 Modelsresolution
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceNuclear magnetic resonance structure shows that the severe acute respiratory syndrome coronavirus-unique domain contains a macrodomain fold., Chatterjee A, Johnson MA, Serrano P, Pedrini B, Joseph JS, Neuman BW, Saikatendu K, Buchmeier MJ, Kuhn P, Wuthrich K, J Virol. 2009 Feb;83(4):1823-36. Epub 2008 Dec 3. PMID:19052085
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (655 Kb) [Save to disk]
  • Biological Unit Coordinates (2jzd.pdb1.gz) 34 Kb
  • CSU: Contacts of Structural Units for 2JZD
  • Original NMR restraints for 2JZD from PDB
  • Retrieve 2JZD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JZD from S2C, [Save to disk]
    • View 2JZD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2JZD
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2JZD, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2jzd_A] [2jzd]
  • SWISS-PROT database: [P0C6X7]
  • Domain organization of [R1AB_CVHSA] by SWISSPFAM
    • Other resources with information on 2JZD
  • Community annotation for 2JZD at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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