2JZJ Carbohydrate Binding Protein date Jan 09, 2008
title Structure Of Crcvnh (C. Richardii Cvnh)
authors L.M.I.Koharudin, A.R.Viscomi, J.Jee, S.Ottonello, A.M.Gronenborn
compound source
Molecule: Cyanovirin-N Homolog
Chain: A
Synonym: Cyanovirin-N-Like Protein
Engineered: Yes
 Organism_scientific: Ceratopteris Richardii
Organism_taxid: 49495
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet22b
methodSolution NMR
Primary referenceThe evolutionarily conserved family of cyanovirin-N homologs: structures and carbohydrate specificity., Koharudin LM, Viscomi AR, Jee JG, Ottonello S, Gronenborn AM, Structure. 2008 Apr;16(4):570-84. PMID:18400178
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (783 Kb) [Save to disk]
  • Biological Unit Coordinates (2jzj.pdb1.gz) 26 Kb
  • CSU: Contacts of Structural Units for 2JZJ
  • Original NMR restraints for 2JZJ from PDB
  • Retrieve 2JZJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JZJ from S2C, [Save to disk]
    • View 2JZJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2JZJ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2JZJ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2jzj] [2jzj_A]
  • SWISS-PROT database: [P86326] [D0VWW7]
  • Domain organization of [CVNH_CERRI] [D0VWW7_CERRI] by SWISSPFAM
  • Domain found in 2JZJ: [CVNH ] by SMART
    • Other resources with information on 2JZJ
  • Community annotation for 2JZJ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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