2K4W Oxidoreductase date Jun 20, 2008
title The Solution Structure Of The Monomeric Copper, Zinc Superox Dismutase From Salmonella Enterica
authors M.Mori, B.Jimenez, M.Piccioli, A.Battistoni, M.Sette, Structural Proteomics In Europe (Spine)
compound source
Molecule: Superoxide Dismutase [Cu-Zn]
Chain: A
Synonym: C2sod
Ec: 1.15.1.1
Engineered: Yes
Mutation: Yes
 Organism_scientific: Salmonella Enterica Subsp. Enterica Se Choleraesuis;
Organism_taxid: 119912
Gene: Sodc2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector: Pse420
methodSolution NMR
ligand CU1, ZN enzyme Oxidoreductase E.C.1.15.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A
  • superoxide dismutase activit...


    • Primary referenceThe Solution Structure of the Monomeric Copper, Zinc Superoxide Dismutase from Salmonella enterica: Structural Insights To Understand the Evolution toward the Dimeric Structure., Mori M, Jimenez B, Piccioli M, Battistoni A, Sette M, Biochemistry. 2008 Nov 12. PMID:19006322
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1241 Kb) [Save to disk]
  • Biological Unit Coordinates (2k4w.pdb1.gz) 41 Kb
  • LPC: Ligand-Protein Contacts for 2K4W
  • CSU: Contacts of Structural Units for 2K4W
  • Original NMR restraints for 2K4W from PDB
  • Retrieve 2K4W in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2K4W from S2C, [Save to disk]
    • View 2K4W in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2K4W
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2K4W, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2k4w] [2k4w_A]
  • SWISS-PROT database: [Q704S6]
  • Domain organization of [Q704S6_SALET] by SWISSPFAM
    • Other resources with information on 2K4W
  • Community annotation for 2K4W at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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