2K53 Structural Genomics, Unknown Function date Jun 24, 2008
title Nmr Solution Structure Of A3dk08 Protein From Clostridium Thermocellum: Northeast Structural Genomics Consortium Targ
authors G.V.T.Swapna, W.Huang, M.Jiang, E.L.Foote, R.Xiao, R.Nair, J.Evere T.B.Acton, B.Rost, G.T.Montelione, Northeast Structural Genomi Consortium (Nesg)
compound source
Molecule: A3dk08 Protein
Chain: A
Engineered: Yes
 Organism_scientific: Clostridium Thermocellum Atcc 27405
Organism_taxid: 203119
Gene: Cthe_3092
Expression_system: Escherichia Coli
Expression_system_strain: Bl21(De3)+Magic
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet 21-23c
methodSolution NMR
Gene CTHE
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (397 Kb) [Save to disk]
  • Biological Unit Coordinates (2k53.pdb1.gz) 20 Kb
  • CSU: Contacts of Structural Units for 2K53
  • Original NMR restraints for 2K53 from PDB
  • Retrieve 2K53 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2K53 from S2C, [Save to disk]
    • View 2K53 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2K53
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2K53, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2k53] [2k53_A]
  • SWISS-PROT database: [A3DK08]
  • Domain organization of [A3DK08_CLOTH] by SWISSPFAM
    • Other resources with information on 2K53
  • Community annotation for 2K53 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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