2K6D	Sh3 Domain Ubiquitin	date	Jul 07, 2008
title	Cin85 Sh3-C Domain In Complex With Ubiquitin
authors	J.Forman-Kay, I.Bezsonova
compound		source
Molecule: Sh3 Domain-Containing Kinase-Binding Protein 1 Chain: A Fragment: Cin85 Sh3-C Domain Synonym: Cbl-Interacting Protein Of 85 Kda, Human Src Famil Binding Protein 1, Hsb-1, Cd2-Binding Protein 3, Cd2bp3; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Sh3kbp1, Cin85 Expression_system: Escherichia Coli Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28-B
Molecule: Ubiquitin Chain: B Fragment: Ubiquitin Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Rps27a, Uba80, Ubcep1, Uba52, Ubcep2, Ubb, Ubc Expression_system: Escherichia Coli Expression_system_vector_type: Plasmid Expression_system_plasmid: Petm11
method	Solution NMR
Gene Ontology	Chain Function Process Component A
Primary reference	Interactions between the Three CIN85 SH3 Domains and Ubiquitin: Implications for CIN85 Ubiquitination., Bezsonova I, Bruce MC, Wiesner S, Lin H, Rotin D, Forman-Kay JD, Biochemistry. 2008 Aug 5. PMID:18680311

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (307 Kb) [Save to disk] Biological Unit Coordinates (2k6d.pdb1.gz) 39 Kb CSU: Contacts of Structural Units for 2K6D Original NMR restraints for 2K6D from PDB Retrieve 2K6D in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2K6D from S2C, [Save to disk]

View 2K6D in 3D

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Visual 3D analysis of 2K6D

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2K6D, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2k6d] [2k6d_A] [2k6d_B] SWISS-PROT database: [Q96B97] [P62988] Domain organization of [SH3K1_HUMAN] [UBIQ_HUMAN] by SWISSPFAM Domains found in 2K6D: [SH3] [UBQ ] by SMART

Other resources with information on 2K6D

Community annotation for 2K6D at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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