2K6M Structural Protein date Jul 11, 2008
title Solution Structure Of Human Supervillin Headpiece
authors J.W.Brown, V.Didem, C.Mcknight
compound source
Molecule: Supervillin
Chain: S
Fragment: Unp Residues 2149-2214, Hp
Synonym: Archvillin, P205p250
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Svil
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector: Psvhp(Pet24a)
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
S


Primary referenceHow to arm a supervillin: designing F-actin binding activity into supervillin headpiece., Brown JW, Vardar-Ulu D, McKnight CJ, J Mol Biol. 2009 Oct 30;393(3):608-18. Epub 2009 Aug 14. PMID:19683541
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (407 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 2K6M
  • Original NMR restraints for 2K6M from PDB
  • Retrieve 2K6M in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2K6M from S2C, [Save to disk]
  • View 2K6M in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2K6M
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2K6M, from MSDmotif at EBI
  • Fold representative 2k6m from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2k6m] [2k6m_S]
  • SWISS-PROT database: [O95425]
  • Domain organization of [SVIL_HUMAN] by SWISSPFAM
  • Domain found in 2K6M: [VHP ] by SMART
  • Other resources with information on 2K6M
  • Community annotation for 2K6M at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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