2K7L Transcription date Aug 13, 2008
title Nmr Structure Of A Complex Formed By The C-Terminal Domain O Rap74 And A Phosphorylated Peptide From The Central Domain Fcp1
authors A.Yang, K.L.Abbott, A.Desjardins, P.Di Lello, J.G.Omichinski, P.L
compound source
Molecule: Centfcp1-T584po4 Peptide
Chain: B
Fragment: C-Terminal Domain (Unp Residues 451 To 517)
Engineered: Yes
Synthetic: Yes
Other_details: The Peptide Was Chemically Synthesized By Th Phase Method;

Molecule: General Transcription Factor Iif Subunit 1
Chain: A
Synonym: Transcription Initiation Factor Iif Subunit Alpha, Alpha, Transcription Initiation Factor Rap74, General Trans Factor Iif Polypeptide 1 74 Kda Subunit Protein;
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Gtf2f1, Rap74
Expression_system: Escherichia Coli
Expression_system_strain: Topp2
methodSolution NMR
ligand TPO enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceNMR structure of a complex formed by the carboxyl-terminal domain of human RAP74 and a phosphorylated peptide from the central domain of the FCP1 phosphatase., Yang A, Abbott KL, Desjardins A, Di Lello P, Omichinski JG, Legault P, Biochemistry. 2009 Mar 10;48(9):1964-74. PMID:19215094
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (519 Kb) [Save to disk]
  • Biological Unit Coordinates (2k7l.pdb1.gz) 28 Kb
  • LPC: Ligand-Protein Contacts for 2K7L
  • CSU: Contacts of Structural Units for 2K7L
  • Likely Quarternary Molecular Structure file(s) for 2K7L
  • Original NMR restraints for 2K7L from PDB
  • Retrieve 2K7L in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2K7L from S2C, [Save to disk]
  • View 2K7L in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2K7L
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2K7L, from MSDmotif at EBI
  • Fold representative 2k7l from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2k7l_A] [2k7l] [2k7l_B]
  • SWISS-PROT database: [Q9Y5B0] [P35269]
  • Domain organization of [CTDP1_HUMAN] [T2FA_HUMAN] by SWISSPFAM
  • Other resources with information on 2K7L
  • Community annotation for 2K7L at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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