2K7P Structural Protein date Aug 19, 2008
title Filamin A Ig-Like Domains 16-17
authors O.K.Heikkinen, I.Kilpelainen, H.Koskela, P.Permi, S.Heikkinen, J.Ylanne
compound source
Molecule: Filamin-A
Chain: A
Fragment: Filamin 16-17, Unp Residues 1772-1956
Synonym: Alpha-Filamin, Filamin-1, Endothelial Actin- Binding Protein, Actin-Binding Protein 280, Abp-280, Non- Muscle Filamin;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Vector
Expression_system_vector: Pgex-4t1-Htb
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceAtomic structures of two novel immunoglobulin-like domain pairs in the actin cross-linking protein filamin., Heikkinen OK, Ruskamo S, Konarev PV, Svergun DI, Iivanainen T, Heikkinen SM, Permi P, Koskela H, Kilpelainen I, Ylanne J, J Biol Chem. 2009 Sep 11;284(37):25450-8. Epub 2009 Jul 21. PMID:19622754
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1888 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 2K7P
  • Original NMR restraints for 2K7P from PDB
  • Retrieve 2K7P in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2K7P from S2C, [Save to disk]
  • View 2K7P in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2K7P
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2K7P, from MSDmotif at EBI
  • Fold representative 2k7p from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2k7p_A] [2k7p]
  • SWISS-PROT database: [P21333]
  • Belongs to the dystrophin (dystrophin) family according to TCDB.
  • Domain organization of [FLNA_HUMAN] by SWISSPFAM
  • Domain found in 2K7P: [IG_FLMN ] by SMART
  • Other resources with information on 2K7P
  • Community annotation for 2K7P at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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