2K8V Oxidoreductase date Sep 25, 2008
title Solution Structure Of Oxidised Erp18
authors M.L.Rowe, H.I.Alanen, L.W.Ruddock, G.Kelly, J.M.Schmidt, R.A.Will M.J.Howard
compound source
Molecule: Thioredoxin Domain-Containing Protein 12
Chain: A
Fragment: Unp Residues 24-172
Synonym: Thioredoxin-Like Protein P19, Endoplasmic Reticulu Erp19, Erp18, Htlp19;
Ec: 1.8.4.2
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Txndc12, Tlp19, Unq713pro1376
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 (De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Plyss
methodSolution NMR
ligand
enzyme Oxidoreductase E.C.1.8.4.2 BRENDA
Primary referenceSolution Structure and Dynamics of ERp18, a Small Endoplasmic Reticulum Resident Oxidoreductase ., Rowe ML, Ruddock LW, Kelly G, Schmidt JM, Williamson RA, Howard MJ, Biochemistry. 2009 May 7. PMID:19361226
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1638 Kb) [Save to disk]
  • Biological Unit Coordinates (2k8v.pdb1.gz) 41 Kb
  • CSU: Contacts of Structural Units for 2K8V
  • Original NMR restraints for 2K8V from PDB
  • Retrieve 2K8V in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2K8V from S2C, [Save to disk]
  • View 2K8V in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2K8V
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2K8V, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2k8v] [2k8v_A]
  • SWISS-PROT database: [O95881]
  • Domain organization of [TXD12_HUMAN] by SWISSPFAM
  • Other resources with information on 2K8V
  • Community annotation for 2K8V at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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