2K9A Protein Binding date Oct 06, 2008
title The Solution Structure Of The Arl2 Effector, Bart
authors L.K.Bailey, L.J.Campbell, K.A.Evetts, K.Littlefield, E.Rajendra, D.Nietlispach, D.Owen, H.R.Mott
compound source
Molecule: Adp-Ribosylation Factor-Like Protein 2-Binding Protein;
Chain: A
Synonym: Arf-Like 2-Binding Protein, Binder Of Arf2 Protein 1;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Arl2bp, Bart, Bart1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet 16b
methodSolution NMR
Primary referenceThe structure of binder of Arl2 (BART) reveals a novel G protein binding domain: Implications for function., Bailey LK, Campbell LJ, Evetts KA, Littlefield K, Rajendra E, Nietlispach D, Owen D, Mott HR, J Biol Chem. 2008 Nov 3. PMID:18981177
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1823 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 2K9A
  • Original NMR restraints for 2K9A from PDB
  • Retrieve 2K9A in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2K9A from S2C, [Save to disk]
  • View 2K9A in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2K9A
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2K9A, from MSDmotif at EBI
  • Fold representative 2k9a from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2k9a] [2k9a_A]
  • SWISS-PROT database: [Q9Y2Y0]
  • Domain organization of [AR2BP_HUMAN] by SWISSPFAM
  • Alignments of the sequence of 2K9A with the sequences similar proteins can be viewed for 2K9A's classification [AR2BP_HUMAN] at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list.
  • A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification [AR2BP_HUMAN] at ProtoMap. Click on the Cluster number.
  • Other resources with information on 2K9A
  • Community annotation for 2K9A at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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