OCA Atlas for 2KAA

2KAA

Toxin

date

Nov 04, 2008

title

Solution Structure Of Hirsutellin A From Hirsutella Thompson

authors

A.Viegas, A.L.Macedo, M.Bruix

compound

source

Molecule: Hirsutellin A
Chain: A
Fragment: Residues 1-130 (Unp Residues 35-164)
Synonym: Hta

Organism_scientific: Hirsutella Thompsonii
Organism_taxid: 42368

method

Solution NMR

note

2KAA is a representative structure

Gene
Ontology

Chain	Function	Process	Component
A

Primary reference

Solution structure of hirsutellin A--new insights into the active site and interacting interfaces of ribotoxins., Viegas A, Herrero-Galan E, Onaderra M, Macedo AL, Bruix M, FEBS J. 2009 Apr;276(8):2381-90. PMID:19348010

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (676 Kb) [Save to disk]

Biological Unit Coordinates (2kaa.pdb1.gz) 35 Kb

CSU: Contacts of Structural Units for 2KAA

Original NMR restraints for 2KAA from PDB

Retrieve 2KAA in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 2KAA from S2C, [Save to disk]

View 2KAA in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2KAA

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

3D motif for 2KAA, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2kaa_A] [2kaa]

SWISS-PROT database: [P78696]

Domain organization of [P78696_HIRTH] by SWISSPFAM

Other resources with information on 2KAA

Community annotation for 2KAA at PDBWiki (http://pdbwiki.org)

MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

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