2KBQ Structural Protein date Dec 05, 2008
title Solution Structure Of Harmonin N Terminal Domain
authors M.Zhang, L.Pan, J.Yan, L.Wu
compound source
Molecule: Harmonin
Chain: A
Fragment: N Terminal Domain, Residues 1-80
Synonym: Usher Syndrome Type-1c Protein, Autoimmune Enteropathy-Related Antigen Aie-75, Antigen Ny-Co-38ny-Co- 37, Pdz-73 Protein, Renal Carcinoma Antigen Ny-Ren-3;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Harmonin
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Vector
Expression_system_vector: Pet32a
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceAssembling stable hair cell tip link complex via multidentate interactions between harmonin and cadherin 23., Pan L, Yan J, Wu L, Zhang M, Proc Natl Acad Sci U S A. 2009 Mar 18. PMID:19297620
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (455 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 2KBQ
  • Original NMR restraints for 2KBQ from PDB
  • Retrieve 2KBQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KBQ from S2C, [Save to disk]
  • View 2KBQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2KBQ
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2KBQ, from MSDmotif at EBI
  • Fold representative 2kbq from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2kbq] [2kbq_A]
  • SWISS-PROT database: [Q9Y6N9]
  • Domain organization of [USH1C_HUMAN] by SWISSPFAM
  • Other resources with information on 2KBQ
  • Community annotation for 2KBQ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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