2KDE		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
Primary reference	Structure of the s5a:k48-linked diubiquitin complex and its interactions with rpn13., Zhang N, Wang Q, Ehlinger A, Randles L, Lary JW, Kang Y, Haririnia A, Storaska AJ, Cole JL, Fushman D, Walters KJ, Mol Cell. 2009 Aug 14;35(3):280-90. PMID:19683493

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (260 Kb) [Save to disk] Biological Unit Coordinates (2kde.pdb1.gz) 38 Kb CSU: Contacts of Structural Units for 2KDE Original NMR restraints for 2KDE from PDB Retrieve 2KDE in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2KDE from S2C, [Save to disk]

View 2KDE in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2kde] [2kde_A] [2kde_B] [2kde_C] SWISS-PROT database: [P55036] [P62972] Domains found in 2KDE: [UBQ] [UIM ] by SMART

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