2KDQ		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	DPR	enzyme
Primary reference	Simultaneous recognition of HIV-1 TAR RNA bulge and loop sequences by cyclic peptide mimics of Tat protein., Davidson A, Leeper TC, Athanassiou Z, Patora-Komisarska K, Karn J, Robinson JA, Varani G, Proc Natl Acad Sci U S A. 2009 Jul 7. PMID:19584251

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (201 Kb) [Save to disk] Biological Unit Coordinates (2kdq.pdb1.gz) 20 Kb LPC: Ligand-Protein Contacts for 2KDQ CSU: Contacts of Structural Units for 2KDQ Original NMR restraints for 2KDQ from PDB Retrieve 2KDQ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2KDQ from S2C, [Save to disk]

View 2KDQ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2kdq] [2kdq_A] [2kdq_B] SWISS-PROT database:

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