2KFL Unknown Function date Feb 24, 2009
title Tammar Wallaby Prion Protein (121-230)
authors B.Christen, S.Hornemann, F.F.Damberger, K.Wuthrich
compound source
Molecule: Major Prion Protein
Chain: A
Engineered: Yes
 Organism_scientific: Macropus Eugenii
Organism_common: Tammar Wallaby
Organism_taxid: 9315
Gene: Prnp
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector: Prseta
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referencePrion protein NMR structure from tammar wallaby (Macropus eugenii) shows that the beta2-alpha2 loop is modulated by long-range sequence effects., Christen B, Hornemann S, Damberger FF, Wuthrich K, J Mol Biol. 2009 Jun 26;389(5):833-45. Epub 2009 Apr 23. PMID:19393664
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (595 Kb) [Save to disk]
  • Biological Unit Coordinates (2kfl.pdb1.gz) 30 Kb
  • CSU: Contacts of Structural Units for 2KFL
  • Original NMR restraints for 2KFL from PDB
  • Retrieve 2KFL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KFL from S2C, [Save to disk]
    • View 2KFL in 3D
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  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2KFL
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2KFL, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2kfl] [2kfl_A]
  • SWISS-PROT database: [Q58YZ3]
  • Domain organization of [Q58YZ3_MACEU] by SWISSPFAM
  • Domain found in 2KFL: [PRP ] by SMART
    • Other resources with information on 2KFL
  • Community annotation for 2KFL at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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